rs32246539 SNP Detail

Summary

• ID
  rs32246539
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70229724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGGTGA GCTGTCACTA
  GTATTCTTAG TCATAGGCAT TCCGGGTCGG TAGCTTTAGG AACAGACACC TGAGGATCTG
  GAGGGTCCCT TGGTCTCTGA CTTGATGAGA GGTGCCCCAA GTCCCTCTCC CTTTCAGGGA
  AACCAGACCA GGAGATCTAT AGCTGTGCAC GACCGCCTTT GACTCTTGCC TCTGATACCC
  Y
  TGCAGCTCTA TGAAATTGCA CGCAGTGCCT ACAGGAACAA AGAGAGGGTC AAAATGGTCG
  TCTTTCCTCC TGGCTTCCAT CACGACTATC TCTTTAAGAG CCCCATGCTG TTAAGTACTG
  TGAGGTGAGA ACTCTTGCTA ACTGAGAGAC CCCTGTGATG CAATGGTGAC TAGGCAGCCT
  AGAGTTAGTC AGCCCAAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47143529	NES11252242	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32246539					SNP	C	C	C	T	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47143529	NES11252242	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70229724 () rs orientation: forward

Symbol	Name	Function Class
Abhd12b	abhydrolase domain containing 12B	within coordinates
Gm60189	predicted gene, 60189	within coordinates