rs32247579 SNP Detail

Summary

• ID
  rs32247579
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134655683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATT CCCTGTCATC ACAATTTGTA
  K
  TGTGACTAGC AGCTGCCTCT TAAGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45625415	mCV24216200	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G	G
ss147538896	ENSMUSSNP2902160	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		G
ss321350009	CHEV_4_134484287	CHEVERUD	SCREENING_POP	f	SNP						T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32247579					SNP	G	G	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134655683 () rs orientation: forward

Symbol	Name	Function Class
Rr367744	regulatory region 367744	1662 bp upstream
Rsrp1	arginine/serine rich protein 1	1002 bp downstream
Tssr39593	transcription start site region 39593	1769 bp downstream
Tssr39594	transcription start site region 39594	1682 bp downstream
Tssr39595	transcription start site region 39595	1642 bp downstream
Tssr43947	transcription start site region 43947	1001 bp upstream