rs32247879 SNP Detail

Summary

• ID
  rs32247879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153617223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAA CGGTTGCTGG ATGCCCAGGT
  R
  CCCCTTACAT AACCTGTTTC ATGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45124050	mCV24630508	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145749158	ENSMUSSNP439532	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32247879					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153617223 () rs orientation: forward

Symbol	Name	Function Class
Cpgi870	CpG island 870	873 bp distal
Gm28513	predicted gene 28513	within coordinates
Rgs16	regulator of G-protein signaling 16	within coordinates
Rr420742	regulatory region 420742	1268 bp distal
Rr420743	regulatory region 420743	1118 bp distal
Rr420744	regulatory region 420744	1114 bp proximal
Tssr9477	transcription start site region 9477	1117 bp downstream
Tssr9478	transcription start site region 9478	937 bp downstream