rs32248572 SNP Detail

Summary

• ID
  rs32248572
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:23627338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGATATATA TGTTAATCTA
  TGTTGAACTG TGTTATTGGT ACACAGGTGG CTTTATCAGA AATATTTGGG TTTTTCTGTT
  GTTGTTGTTG TTGTTGTGTG GATAAGTAGT ATAAAAATTT TCTCAAATCC AACAACTTAA
  TTTTTATAAC TGAATTCAGT TACACAACCT TCTTGGTTAC TGTGTTGTAA CCCTACATGT
  W
  ATTAATATAC ACATCGTCTT TAATATGTTA TTGAAACATA AGGTAATTGT ATTCTTTTCA
  TGTTGCATTT GTATTTTCTT TTAATTTTTA TTGATTAAGT GATTTTATTA AGTTACAACC
  CATTTGCAGC CTCCCCTCCC TCCAAATTAT TTTGAATTCT GTTGACAGAA TCACATACTC
  ATACTAGTCA CTTTTATGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46122903	mCV25423483	ABI	CRAMUS_MOUSE	f	SNP	T	T	A					T		T
ss60978312	NES16145468	PERLEGEN	MM_PANEL2	f	SNP	T		A	T	A	T	T		T	T	T	T	T	T	T	T	T
ss148580212	ENSMUSSNP35937	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32248572					SNP	T	T	A	T	A	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978312	NES16145468	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:23627338 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r179	vomeronasal 1 receptor 179	473 bp upstream