rs32249444 SNP Detail

Summary

• ID
  rs32249444
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:164268581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAAGGATGG CATTGCTTCA TTCATGGTCT GAGAAATAAC
  CGTTCAGAAA AGATGAGACA ACACCAGTTC TTTTCTGTAA AGAATTTCTT ACAAAATGGT
  K
  AACAGTGACA ACCTGCTGAT CAAGTAATGG TCACTTGTTA GAAACTGTGT GGTTATCAAA
  GGGCAGAGAC CGTGGTAGGT TCTAGGTTTA GTAATGAAA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45124058	mCV24721484	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	G
ss145978689	ENSMUSSNP4222127	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32249444					SNP	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164268581 () rs orientation: forward

Symbol	Name	Function Class
Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide	within coordinates
Rr20253	regulatory region 20253	1181 bp distal
Rr25448	regulatory region 25448	1621 bp distal
Rr31656	regulatory region 31656	within coordinates
Tssr14743	transcription start site region 14743	546 bp downstream
Tssr14744	transcription start site region 14744	595 bp downstream