rs32250264 SNP Detail

Summary

• ID
  rs32250264
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45110087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGGGCAGA GAGCCTTGGG
  TTACCGTGTG TGCACCTCCC TCGGGTGCTC TGGAAGGTGA CATGTGGAGG CCCAGACAGG
  ACTTTGGAGT TCTGGTCAGC CTGTCTGTCT GGGTCTGTGT CAGTGAACCT GTCTTTCTAG
  AAACAGACAC GCATGATGGC GCTTGGAGAA TTGCTGGGCT CCTTCCTGGA GTTTGGTCCA
  R
  AAGCCTCCTT GCAGGTTGCT CTTTTGGAAT CAAAAGGCCC GAGAGTTAGG GAGAGCAAGA
  ACTCAGGACC CAGAAACAGA CAGTCAGTCT TACGCAGAAC AGTTGGGGCA TGCAAGGCCC
  AACTGGACTT TTGAGGACAG GACGGGCTCA TACCAGGGTC TAATCTCAGA AGCCTGGGAA
  GAGAGCAAAG GGAAACGAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46123216	mCV22696589	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss149135488	ENSMUSSNP1998732	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32250264					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45110087 () rs orientation: forward

Symbol	Name	Function Class
Bax	BCL2-associated X protein	1034 bp downstream
Cpgi19060	CpG island 19060	1233 bp distal
Cpgi19061	CpG island 19061	529 bp distal
Ftl1	ferritin light polypeptide 1	779 bp upstream
Gm10252	predicted gene 10252	363 bp downstream
Gm73429	predicted gene, 73429	within coordinates
Gm73431	predicted gene, 73431	346 bp upstream
Rr380754	regulatory region 380754	within coordinates
Rr646450	regulatory region 646450	289 bp distal
Rr646451	regulatory region 646451	554 bp distal
Rr646452	regulatory region 646452	within coordinates
Rr646453	regulatory region 646453	357 bp proximal
Rr646454	regulatory region 646454	790 bp proximal
Tssr66541	transcription start site region 66541	975 bp downstream
Tssr66542	transcription start site region 66542	401 bp upstream
Tssr72395	transcription start site region 72395	1238 bp upstream
Tssr72396	transcription start site region 72396	1206 bp upstream
Tssr72397	transcription start site region 72397	932 bp upstream
Tssr72398	transcription start site region 72398	782 bp upstream
Tssr72399	transcription start site region 72399	259 bp downstream
Tssr72400	transcription start site region 72400	297 bp downstream