rs32250498 SNP Detail

Summary

• ID
  rs32250498
• Variation Type
  SNP
• Alleles
  A/C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138800670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCAAAGCCA GTGAGCTGGG
  TCAGGGCAGC TGCAGTAACT GCCTCTGTGC ACATCACGTT AAGCTTCTTG GGGCAGAAGA
  AATAGGTCAG TGGTTGAAAA AGCTTTCTGG GGAGCAGGCT AGGCTCTCTG TAAACACCCA
  CATGGACAGT TCTTGACTCT CTGTGACTCT AGTTTCAGAG GATCTGACAC CCTCTTCATT
  H
  ATATGTGTAT ATATATATAT ATATATATAT ATATATATAT ATGGTTTGTT TTTTTTTGAG
  ACAGGGTTTC TCTGTGTAGC CCTAGCTGTC CTGGAACTCA CTTTGTAGAC CAGGCTGGCC
  TCGAACTCAG AAATCTGCCT GCCTCTGCCT CCCGAGTGCT GGGATTAAAG GCGTGCGCCA
  CCACGCCCGG CTAATTTTCT                                            
  
  H = A/C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46123709	mCV23696936	ABI	CRAMUS_MOUSE	f	SNP	A	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32250498					SNP	A	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138800670 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Rr657518	regulatory region 657518	1424 bp distal
Rr657519	regulatory region 657519	114 bp distal
Rr657520	regulatory region 657520	1036 bp proximal
Tssr69706	transcription start site region 69706	135 bp downstream