rs32251147 SNP Detail

Summary

• ID
  rs32251147
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98853447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTTC TCTCTTAACT CTTATGTTTA
  R
  AATTGATAGT AATGAATAAA TCCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39380923	mCV25405380	ABI	CRAMUS_MOUSE	f	SNP	A	A					G
ss63622703	NES17045869	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A		A	A	A	A		A	G	G	A		A
ss148461916	ENSMUSSNP3781166	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss325079281	CHEV_15_98785997	CHEVERUD	SCREENING_POP	f	SNP												G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32251147					SNP	A	A	A	G	A	A	G	A	A	A	A	G	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63622703	NES17045869	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98853447 () rs orientation: forward

Symbol	Name	Function Class
B430209F14Rik	RIKEN cDNA B430209F14 gene	within coordinates
Cpgi7685	CpG island 7685	1850 bp distal
Gm56698	predicted gene, 56698	within coordinates
Rr404613	regulatory region 404613	1795 bp downstream
Rr509238	regulatory region 509238	1906 bp distal
Rr509239	regulatory region 509239	1373 bp distal
Rr509240	regulatory region 509240	within coordinates
Tssr132971	transcription start site region 132971	1797 bp downstream
Tssr136337	transcription start site region 136337	1975 bp upstream
Tssr136338	transcription start site region 136338	1959 bp upstream
Tssr136339	transcription start site region 136339	1907 bp upstream
Tssr136340	transcription start site region 136340	1890 bp upstream
Tssr136341	transcription start site region 136341	1867 bp upstream
Tssr136342	transcription start site region 136342	80 bp upstream
Tssr136343	transcription start site region 136343	1581 bp downstream