rs32256385 SNP Detail

Summary

• ID
  rs32256385
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155869087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGG GCAGAGTCCA GAAAGAAAAG
  S
  GTAAGGCTGG GAGGCCTGCC TGGAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss45625599	mCV24976100	ABI	CRAMUS_MOUSE	f	SNP	G			C	G
ss46783968	NES10996754	PERLEGEN	MM_PANEL2	f	SNP		G	G		G		C	C
ss148115519	ENSMUSSNP227465	ENSEMBL	ENSEMBL_Sanger	f	SNP					G
ss321442827	CHEV_4_155158739	CHEVERUD	SCREENING_POP	f	SNP						C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs32256385					SNP	G	G	G	C	G	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46783968	NES10996754	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155869087 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15485	CpG island 15485	within coordinates
Rr606569	regulatory region 606569	464 bp distal
Rr606570	regulatory region 606570	15 bp proximal
Rr606571	regulatory region 606571	1352 bp proximal
Tmem278	transmembrane protein 278	within coordinates
Tssr44971	transcription start site region 44971	600 bp upstream
Tssr44972	transcription start site region 44972	268 bp downstream
Tssr44973	transcription start site region 44973	306 bp downstream
Tssr44974	transcription start site region 44974	378 bp downstream
Tssr44975	transcription start site region 44975	392 bp downstream
Tssr44976	transcription start site region 44976	419 bp downstream
Tssr44977	transcription start site region 44977	429 bp downstream
Tssr44978	transcription start site region 44978	1234 bp downstream
Tssr44979	transcription start site region 44979	1253 bp downstream