rs32259412 SNP Detail

Summary

• ID
  rs32259412
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16679281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAC ATTAGGGGAG AGAATGGGAT
  Y
  TGGAAAATCC TGAGTAAGGA CCGCG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46124116	mCV23532811	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148400035	ENSMUSSNP1169794	ENSEMBL	ENSEMBL_Sanger	f	SNP	C			C
ss322112025	CHEV_7_17530705	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32259412					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16679281 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18406	CpG island 18406	within coordinates
Cpgi18407	CpG island 18407	904 bp proximal
Gm71929	predicted gene, 71929	within coordinates
Pnma8b	PNMA family member 8B	within coordinates
Rr368243	regulatory region 368243	699 bp downstream
Rr642821	regulatory region 642821	1987 bp distal
Rr642822	regulatory region 642822	664 bp distal
Rr642823	regulatory region 642823	730 bp distal
Rr642824	regulatory region 642824	287 bp proximal
Tssr64660	transcription start site region 64660	636 bp downstream
Tssr64661	transcription start site region 64661	338 bp upstream
Tssr70792	transcription start site region 70792	293 bp downstream