rs32260811 SNP Detail

Summary

• ID
  rs32260811
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148711038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACTTCCGC CCGTGGCTTC ACAGCCAAGC AGAGGCCCGG
  CGTCCCGCTC CGGCTACTGC CCGCGCTTAG GCCTTAACGA CGCGGCTGCG CGAGGCCAAC
  Y
  AGGCCCCGCT CTACCGCTCC CTCCCCGCGG CGCAGGCCGC ACCGGGCCTC TCCGAAGCAA
  CACTCGAGGC ACGCAGGCCG GCCTTGGCGA CCAACCTAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45626821	mCV24948173	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32260811					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148711038 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15308	CpG island 15308	within coordinates
Rr100545	regulatory region 100545	1837 bp distal
Rr100546	regulatory region 100546	within coordinates
Rr398860	regulatory region 398860	368 bp upstream
Tardbp	TAR DNA binding protein	within coordinates
Tssr44612	transcription start site region 44612	150 bp downstream
Tssr44613	transcription start site region 44613	175 bp downstream
Tssr44614	transcription start site region 44614	428 bp downstream