rs32261327 SNP Detail

Summary

• ID
  rs32261327
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136609865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGCA GAGGGTCAGG AATAGAGACA
  Y
  GTGGGACATC CTGAGGTGGG AAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45772896	mCV25027806	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss144515990	ENSMUSSNP3349794	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss321699782	CHEV_5_137056881	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32261327					SNP	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136609865 () rs orientation: forward

Symbol	Name	Function Class
Rr622654	regulatory region 622654	149 bp proximal
Tssr1674	transcription start site region 1674	632 bp downstream
Tssr1675	transcription start site region 1675	687 bp downstream
Tssr53860	transcription start site region 53860	560 bp downstream
Tssr53861	transcription start site region 53861	609 bp downstream
Tssr53862	transcription start site region 53862	659 bp downstream
Tssr53863	transcription start site region 53863	672 bp downstream
Tssr53864	transcription start site region 53864	709 bp downstream
Tssr53865	transcription start site region 53865	741 bp downstream
Tssr53866	transcription start site region 53866	769 bp downstream
Tssr53867	transcription start site region 53867	838 bp downstream