rs32261877 SNP Detail

Summary

• ID
  rs32261877
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:55476287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGGGTGGC GTGGACAGGG
  CCTGTGTGGA GACCAGCAAG CATTCATCAA GGGGAACAAA GTTAGGAAAT TACTGATAAT
  ATTGATACAT ATACAATGAT ACAAATGTAT CAAAAGAAGC CTAAACTAGG GCCCGGCATG
  GTGGCCCATG CCTTTAATCC CAGCAGTGGC TGTCCTGTAA CTCACTCTGT AGACTAGGCT
  K
  GCCTCAGACT CAGAAATCCG CCTGCCTCTG CCTCCCAAGT GCTGGGATTA AAGGCCTGAG
  CCACCACTGC CCGGGTGATC TATGAAAATT TTTGGCTCAT TCTAGTCATA CAAACACAAT
  GTAGAAAAGG AACACAATCA AGGTCAGGAC CTAAGTTGTG AAAGCATGAA CTTCTGCTCC
  CAGAAGACAC ATTTGTAGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45626829	mCV23473007	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss146361513	ENSMUSSNP6428732	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32261877					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:55476287 () rs orientation: forward

Symbol	Name	Function Class
Gm12510	predicted gene 12510	within coordinates
Rr376520	regulatory region 376520	within coordinates
Tssr37333	transcription start site region 37333	1297 bp upstream
Tssr37334	transcription start site region 37334	1439 bp upstream
Tssr37335	transcription start site region 37335	1585 bp upstream
Tssr37336	transcription start site region 37336	1636 bp upstream
Tssr37337	transcription start site region 37337	1899 bp upstream
Tssr41779	transcription start site region 41779	886 bp upstream
Tssr41780	transcription start site region 41780	1095 bp downstream