rs32263487 SNP Detail

Summary

• ID
  rs32263487
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:60058919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGCCAGT GCTAGGAGCC
  GTGGACCTGA AACTGAAGTA TGGTTTCCTC AGAAGGATTC ATGAAGTTTA ATCATATGTT
  TTAAAAAAAT GTAGAAGGAT TTAGAGAAAT AGTAGAAAAC GATGAAATTG AGGAAAAAAC
  AAGTAGACTT AGAGAGATAC CAAAAAAAAA AAAATGTGTA TAATACTGGG TTATTGGAAT
  W
  GGGAGGGTAC TCACCATTTT TGATTTTGCT TTCCAAGTCA GGTTTCAAAG AGTTTAACGA
  GACAGCACCA CCACTTGCCT GAAGAGAGCA GGCTGGAAGT CAGCATACTG TCCAATCACA
  GCAAGTTGAA GAAAAACAAC AGTTGAGGGG CAGCCAGAAT TTTGTTCAAA TCATGGCACC
  ATTACCACTA TAGTAAGTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39382491	mCV27552960	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
ss147991251	ENSMUSSNP2690002	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs32263487					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:60058919 () rs orientation: forward

Symbol	Name	Function Class
Gm2682	predicted gene 2682	within coordinates
Gm41331	predicted gene, 41331	within coordinates
Rr390810	regulatory region 390810	within coordinates
Rr502965	regulatory region 502965	298 bp proximal
Tssr4605	transcription start site region 4605	134 bp downstream
Tssr134460	transcription start site region 134460	173 bp upstream
Tssr134461	transcription start site region 134461	39 bp upstream
Tssr134462	transcription start site region 134462	44 bp downstream
Tssr134463	transcription start site region 134463	104 bp downstream
Tssr134464	transcription start site region 134464	198 bp downstream
Tssr134465	transcription start site region 134465	252 bp downstream
Tssr134466	transcription start site region 134466	265 bp downstream
Tssr134467	transcription start site region 134467	301 bp downstream
Tssr134468	transcription start site region 134468	328 bp downstream
Tssr134469	transcription start site region 134469	359 bp downstream