rs32263623 SNP Detail

Summary

• ID
  rs32263623
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:23628875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAGTGAAG CTTTGGTCAC
  AGGCTTTCCC ACTATCTCTC CCTTACTGTT GATCTTCAGA AAATCTAAGG ATCCTTGTTC
  TGTGTTCTTC CGATTGTTGA AATCCTGAGT CTCTAAAAAT GCCAAACACA GAGATAGCTT
  TATTAATACT ATTAAATACT TTATTCCATG AATATGTTTT TGACATCTTG GATTAACAAG
  K
  CATGGTGCTC ACTTCTGTAA TTTTAAAAGA ATAAGGTTAT AATCATTTGT TGATGTGAAA
  ACATTTCTGG TTGGAATCTG ACTGACACAG TAAGTGAGTT GTTCACCACT TCTGTTCTGT
  TATATATAAC TGCACTCTGC TCCAGGCAGA TCAAAAACAG ATGAAACCCA TTTTTCCTAA
  ACAGGTTAAT ATGTTATACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46124895	mCV25423472	ABI	CRAMUS_MOUSE	f	SNP	T	G					G		G
ss60978305	NES16145475	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	T	T		G	G	G	G	G	T	G	G
ss148580224	ENSMUSSNP89669	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32263623					SNP	T	G	G	G	T	T	G	G	G	G	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978305	NES16145475	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:23628875 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r179	vomeronasal 1 receptor 179	93 bp downstream