rs32263822 SNP Detail

Summary

• ID
  rs32263822
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136721242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGA CCTGAATTCA ATATTCAGTC
  Y
  CTCTGATCCC TCACATGATG AAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss144517208	ENSMUSSNP6334077	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321700207	CHEV_5_137168258	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs32263822					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136721242 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	612 bp downstream
Myl10	myosin, light chain 10, regulatory	758 bp upstream
Rr127468	regulatory region 127468	242 bp distal
Rr127469	regulatory region 127469	559 bp proximal
Tssr49256	transcription start site region 49256	859 bp downstream
Tssr49257	transcription start site region 49257	432 bp upstream
Tssr49258	transcription start site region 49258	568 bp upstream
Tssr49259	transcription start site region 49259	631 bp upstream
Tssr49260	transcription start site region 49260	696 bp upstream
Tssr49261	transcription start site region 49261	1208 bp upstream
Tssr49262	transcription start site region 49262	1226 bp upstream
Tssr49263	transcription start site region 49263	1269 bp upstream
Tssr49264	transcription start site region 49264	1279 bp upstream
Tssr49265	transcription start site region 49265	1733 bp upstream
Tssr49266	transcription start site region 49266	1755 bp upstream
Tssr49267	transcription start site region 49267	1825 bp upstream