rs32263823 SNP Detail

Summary

• ID
  rs32263823
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136721272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCC CTCACATGAT GAAAGGAGAC
  R
  ACCAACACCT GAAATCTGTC GTCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss144517214	ENSMUSSNP127205	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321700208	CHEV_5_137168288	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs32263823					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136721272 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	582 bp downstream
Myl10	myosin, light chain 10, regulatory	728 bp upstream
Rr127468	regulatory region 127468	272 bp distal
Rr127469	regulatory region 127469	529 bp proximal
Tssr49256	transcription start site region 49256	889 bp downstream
Tssr49257	transcription start site region 49257	402 bp upstream
Tssr49258	transcription start site region 49258	538 bp upstream
Tssr49259	transcription start site region 49259	601 bp upstream
Tssr49260	transcription start site region 49260	666 bp upstream
Tssr49261	transcription start site region 49261	1178 bp upstream
Tssr49262	transcription start site region 49262	1196 bp upstream
Tssr49263	transcription start site region 49263	1239 bp upstream
Tssr49264	transcription start site region 49264	1249 bp upstream
Tssr49265	transcription start site region 49265	1703 bp upstream
Tssr49266	transcription start site region 49266	1725 bp upstream
Tssr49267	transcription start site region 49267	1795 bp upstream