rs32264854 SNP Detail

Summary

• ID
  rs32264854
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136721292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGGGTCAT GGAGGCGTGC
  TATCCAGCCT AGTAGAATAG GTAAGCTCTG TCCAGTAAGA GATCTTGTCT CAATACTGTA
  ACTAAAAAAT GGCCCAGCCA GTAAAAGATG CTTGCTGCCA AGTCTAATGA CCTGAATTCA
  ATATTCAGTC TCTCTGATCC CTCACATGAT GAAAGGAGAC AACCAACACC TGAAATCTGT
  Y
  GTCTAACTTA CACACGGACA CACGGACACA CGGACACACA CACACACTAT GGGCCAGATA
  TTAGGGATAA TAGGCAGCTC AAAGAGAGAT TTGGGGTGGG GAAAGAACCC ACATGAGTGG
  ACAGGGAGCT CTGAGATCCT GTCTAGAAAC AAGTACTGCA GGGGCTGAGA GAGTATGCTA
  GGAATATTCT GGAAGCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144517219	ENSMUSSNP3607077	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32264854					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136721292 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	562 bp downstream
Myl10	myosin, light chain 10, regulatory	708 bp upstream
Rr127468	regulatory region 127468	292 bp distal
Rr127469	regulatory region 127469	509 bp proximal
Tssr49256	transcription start site region 49256	909 bp downstream
Tssr49257	transcription start site region 49257	382 bp upstream
Tssr49258	transcription start site region 49258	518 bp upstream
Tssr49259	transcription start site region 49259	581 bp upstream
Tssr49260	transcription start site region 49260	646 bp upstream
Tssr49261	transcription start site region 49261	1158 bp upstream
Tssr49262	transcription start site region 49262	1176 bp upstream
Tssr49263	transcription start site region 49263	1219 bp upstream
Tssr49264	transcription start site region 49264	1229 bp upstream
Tssr49265	transcription start site region 49265	1683 bp upstream
Tssr49266	transcription start site region 49266	1705 bp upstream
Tssr49267	transcription start site region 49267	1775 bp upstream