rs32264856 SNP Detail

Summary

• ID
  rs32264856
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136721477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGG CTGAGAGAGT ATGCTAGGAA
  Y
  ATTCTGGAAG CTTTTAGCAG CTGGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144517285	ENSMUSSNP4904206	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss321700213	CHEV_5_137168493	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32264856					SNP	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136721477 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	377 bp downstream
Myl10	myosin, light chain 10, regulatory	523 bp upstream
Rr127468	regulatory region 127468	477 bp distal
Rr127469	regulatory region 127469	324 bp proximal
Tssr49256	transcription start site region 49256	1094 bp downstream
Tssr49257	transcription start site region 49257	197 bp upstream
Tssr49258	transcription start site region 49258	333 bp upstream
Tssr49259	transcription start site region 49259	396 bp upstream
Tssr49260	transcription start site region 49260	461 bp upstream
Tssr49261	transcription start site region 49261	973 bp upstream
Tssr49262	transcription start site region 49262	991 bp upstream
Tssr49263	transcription start site region 49263	1034 bp upstream
Tssr49264	transcription start site region 49264	1044 bp upstream
Tssr49265	transcription start site region 49265	1498 bp upstream
Tssr49266	transcription start site region 49266	1520 bp upstream
Tssr49267	transcription start site region 49267	1590 bp upstream