rs32264858 SNP Detail

Summary

• ID
  rs32264858
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136721970 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAA TCTAGAAACT TGCTTGCAGC
  R
  GTGCCCAGAG GTTTGTCTCC ATGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144517295	ENSMUSSNP3653746	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32264858					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136721970 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	within coordinates
Myl10	myosin, light chain 10, regulatory	30 bp upstream
Rr120856	regulatory region 120856	1918 bp proximal
Rr127468	regulatory region 127468	970 bp distal
Rr127469	regulatory region 127469	within coordinates
Tssr49256	transcription start site region 49256	1587 bp downstream
Tssr49257	transcription start site region 49257	279 bp downstream
Tssr49258	transcription start site region 49258	146 bp downstream
Tssr49259	transcription start site region 49259	86 bp downstream
Tssr49260	transcription start site region 49260	12 bp downstream
Tssr49261	transcription start site region 49261	480 bp upstream
Tssr49262	transcription start site region 49262	498 bp upstream
Tssr49263	transcription start site region 49263	541 bp upstream
Tssr49264	transcription start site region 49264	551 bp upstream
Tssr49265	transcription start site region 49265	1005 bp upstream
Tssr49266	transcription start site region 49266	1027 bp upstream
Tssr49267	transcription start site region 49267	1097 bp upstream