rs32265734 SNP Detail

Summary

• ID
  rs32265734
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136722245 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCCGGCT GCTATTTGTA
  TGGGGAAGAC GGGCAGAGCT CCCTGGACCA CGGTGTTCAG GGACCCGTGG CTGGCACTGG
  TGACTTCGGA CCTCTGAAAG AGACAACAGC TACAGGTTTT ATCTCTTGTG CCTAGGCACC
  CAGAAGAGCC CGCAAGAGAG TAGAAGGCAC AGCCAGCTCC AATGTCTTTT CGATGTTCGA
  Y
  CAGTCCCAGA TTCAGGAGTT TAAAGAGGTT GGTTGGTGGC CCTGGTGACC CTGGGGACCC
  TGGGAGTCTA TATTAGTTAG ATTTCTTGTT GCTGCAACAA AGTGCCTGAC AAAAGCGATT
  TAAGGAAGGA AGGAGTCCCT AATTCTGGCT CACAGTTCTA CAGTCTGTGA GGGTTGGGGA
  AGGCATAGGG GCAGGAACAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321700218	CHEV_5_137169261	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs32265734					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136722245 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	within coordinates
Myl10	myosin, light chain 10, regulatory	within coordinates
Rr120856	regulatory region 120856	1643 bp proximal
Rr127468	regulatory region 127468	1245 bp distal
Rr127469	regulatory region 127469	245 bp distal
Tssr49256	transcription start site region 49256	1862 bp downstream
Tssr49257	transcription start site region 49257	554 bp downstream
Tssr49258	transcription start site region 49258	421 bp downstream
Tssr49259	transcription start site region 49259	361 bp downstream
Tssr49260	transcription start site region 49260	287 bp downstream
Tssr49261	transcription start site region 49261	205 bp upstream
Tssr49262	transcription start site region 49262	223 bp upstream
Tssr49263	transcription start site region 49263	266 bp upstream
Tssr49264	transcription start site region 49264	276 bp upstream
Tssr49265	transcription start site region 49265	730 bp upstream
Tssr49266	transcription start site region 49266	752 bp upstream
Tssr49267	transcription start site region 49267	822 bp upstream
Tssr49268	transcription start site region 49268	1800 bp upstream
Tssr49269	transcription start site region 49269	1813 bp upstream
Tssr49270	transcription start site region 49270	1824 bp upstream
Tssr49271	transcription start site region 49271	1849 bp upstream