rs32265742 SNP Detail

Summary

• ID
  rs32265742
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:136722645 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGACG TACCCAGAGA GGTTTCCATG
  R
  TGATTCTAAA TCTAACCAAA TGAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss144517346	ENSMUSSNP3037459	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss321700222	CHEV_5_137169661	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32265742					SNP	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:136722645 () rs orientation: forward

Symbol	Name	Function Class
Gm71524	predicted gene, 71524	within coordinates
Myl10	myosin, light chain 10, regulatory	within coordinates
Rr120856	regulatory region 120856	1243 bp proximal
Rr127468	regulatory region 127468	1645 bp distal
Rr127469	regulatory region 127469	645 bp distal
Tssr49257	transcription start site region 49257	954 bp downstream
Tssr49258	transcription start site region 49258	821 bp downstream
Tssr49259	transcription start site region 49259	761 bp downstream
Tssr49260	transcription start site region 49260	687 bp downstream
Tssr49261	transcription start site region 49261	179 bp downstream
Tssr49262	transcription start site region 49262	149 bp downstream
Tssr49263	transcription start site region 49263	129 bp downstream
Tssr49264	transcription start site region 49264	108 bp downstream
Tssr49265	transcription start site region 49265	330 bp upstream
Tssr49266	transcription start site region 49266	352 bp upstream
Tssr49267	transcription start site region 49267	422 bp upstream
Tssr49268	transcription start site region 49268	1400 bp upstream
Tssr49269	transcription start site region 49269	1413 bp upstream
Tssr49270	transcription start site region 49270	1424 bp upstream
Tssr49271	transcription start site region 49271	1449 bp upstream
Tssr53869	transcription start site region 53869	1824 bp downstream