rs32267579 SNP Detail

Summary

• ID
  rs32267579
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78634512 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTAGC TTGAGGCTAG CACAGCAACT
  S
  GACCTTTCAC CTACTTAAAG AAAAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45126933	mCV22632352	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss144751869	ENSMUSSNP1428550	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C	C
ss319804032	CHEV_1_78653370	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32267579					SNP	G	G	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78634512 () rs orientation: forward

Symbol	Name	Function Class
Acsl3	acyl-CoA synthetase long-chain family member 3	1088 bp upstream
Cpgi461	CpG island 461	699 bp proximal
Rr17618	regulatory region 17618	within coordinates
Rr29694	regulatory region 29694	288 bp proximal
Rr371565	regulatory region 371565	1095 bp downstream
Rr396121	regulatory region 396121	902 bp upstream
Tssr7581	transcription start site region 7581	1061 bp upstream
Tssr7582	transcription start site region 7582	1079 bp upstream
Tssr12428	transcription start site region 12428	1478 bp downstream
Tssr12429	transcription start site region 12429	1495 bp downstream
Utp14b	UTP14B small subunit processome component	1088 bp upstream