rs32268343 SNP Detail

Summary

• ID
  rs32268343
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:30237765 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATATTAT ATGTAGCTAT
  CTACCTATCA TCTATTATTT ATCTGACATA CATAAGTATA ACATATATGA CTAAATTCAA
  TAATACGTTG TTTTGATCAC CTTAATTTTG TAATAGTAGA TGATTTTACT ACTGCTTCCT
  TTCTTACTTT AATTTCAAGT AGGATTAGTT TGCTATTGTA TTTACTTGAC TCTGAGAAAA
  W
  TTGACTGCAA GATTCACCAT TCCAGTCTAC ATTACAAACA GTGATGTGAA GGAAGGGTCG
  TGATGTGAAG ATGTGAATTT TCAGACATAA CTAATATCAA ACACAATCAC ATATGAAAAC
  ATACTCTCTT TGGTAGATTC AGTATAATAC TTAATGTTTA TATTTCATAT GTAGCAAAGA
  GCATTTGAAA AAAAAAAAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39383181	mCV22996750	ABI	CRAMUS_MOUSE	f	SNP	A	T				T		T
ss49433164	NES12619224	PERLEGEN	MM_PANEL2	f	SNP		T	T	T	T		T	T	T	T	T	T	A	T
ss147400325	ENSMUSSNP2054539	ENSEMBL	ENSEMBL_Sanger	f	SNP	A							T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32268343					SNP	A	T	T	T	T	T	T	T	T	T	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49433164	NES12619224	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:30237765 () rs orientation: forward

Symbol	Name	Function Class
Ctnnd2	catenin delta 2	Intron
D15Mit249	DNA Segment, Chr 15, Massachusetts Institute of Technology-249	1734 bp proximal