rs32271394 SNP Detail

Summary

• ID
  rs32271394
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:152915691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACTGTTCTT TCTGCAGAAT TGTTTCCTCT
  GCATGAACAG CTCAGAAATG GTCCACAGTA GCCCCTCAGG CCTCCACAAG AGCTGTCTGC
  ACGTTTCCCT TCTCTTGTAT GCTGTCTTCT CATCCAGATA TCCAAGGCAG GATTTCTATC
  R
  ACTACTATTC TAGTCCCTTC AGCTAAGGGT GGGGAAGGAA AGGGTCAGAG TTCACAAACT
  GGGTGTCAAT TTCCTATCAC TGTGGGTCCC CAAGCCAGTA CAGAAAAACA CTGTAGACCA
  AGACGATGTT TCTCAAGATC TCTTCCACAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45126675	mCV24633909	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss145736579	ENSMUSSNP4680037	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
ss320070031	CHEV_1_154887070	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32271394					SNP	A	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152915691 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
D1Ertd182e	DNA segment, Chr 1, ERATO Doi 182, expressed			516 bp distal
Nmnat2	nicotinamide nucleotide adenylyltransferase 2			Intron
				Noncoding-Transcript-Variant
Rr420580	regulatory region 420580			1735 bp distal
Rr420581	regulatory region 420581			17 bp proximal
Rr420582	regulatory region 420582			412 bp proximal
Rr420583	regulatory region 420583			591 bp proximal