rs32271545 SNP Detail

Summary

• ID
  rs32271545
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150881281 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGTTGAAA CTTAAACCAG
  CCTTGGGTTC TCTACCAAAC CCTACTTTTA AACGTGTTAG CTTCTGTAGG TCAAGTGAGG
  TTTGGTTTGC TAATATGTTG TTAAAGGTTC TACATCTATG ATTTTGGCCC AGCATTTTAT
  TTATTGCAGT GATTTGTGGT TGTTGATGTT ATTGTTGTTA TGTTGATGTT AAGCATCTTG
  K
  AAATCTATTT TCTGAAACTT AGAAACTTGT GTGAATGTGG TAAAATTTCT TTCCTAAATG
  ATAAAATTCT GCCTTAAGCT GGAACAATGG CTCAGTTAAG AACAGTACTG CTCTTGCAGA
  GGACACAGGT TTGAGTCCCA GAGCCCTATC AGGAAGCTCA CAACTACCTG TAACTCCAGC
  TCCAGGGGAT CTGACACCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J
ss45627477	mCV24824481	ABI	CRAMUS_MOUSE	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J
rs32271545					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150881281 () rs orientation: forward

Symbol	Name	Function Class
Gm36806	predicted gene, 36806	within coordinates
Gm69570	predicted gene, 69570	within coordinates
Gm69574	predicted gene, 69574	1598 bp upstream
Mir12196	microRNA 12196	1074 bp downstream
Rr398884	regulatory region 398884	1973 bp upstream
Rr605415	regulatory region 605415	1541 bp distal
Tssr1385	transcription start site region 1385	1131 bp downstream