rs32273217 SNP Detail

Summary

• ID
  rs32273217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18916601 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTACAGCT GGGCTTTCTC
  AGGCCACAGT GGGGGAAGTG GGGGGTCGGA AGGTGAAGGG AGTCCAGAGG GAAACAGAGT
  AGCTAGAATG ACTCACCTGC TGTGAGTGAC TCATTCAGGG AATGTTTGAA GCGGAATGTT
  TAACTCAAGG ATGATCTTGA GAACTTGGTC TTCCTGCCTG CACCTTCAAG GGCTTGGATT
  R
  CAGGATTTTG TGCACCACCA CATCTGGCTC TCATGGATAT CAGTCAGACA GTGTAAACTC
  TGTGATCTGT TTATCTGTGG AAGGTCTTCA CAGGGCTAAG CTCAGGAATG AAGAATTGGA
  GGGTGGGGCA CATTGGTTAA CACACACATA CACGCATATA TACATTCATA CATACATGTA
  TATACGCACA TAAATACATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46125375	mCV22832391	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148469665	ENSMUSSNP1686247	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32273217					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18916601 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18453	CpG island 18453	1103 bp distal
Eml2	echinoderm microtubule associated protein like 2	within coordinates
Mir330	microRNA 330	1114 bp downstream
Rr643020	regulatory region 643020	1462 bp distal
Rr643021	regulatory region 643021	1068 bp distal
Rr643022	regulatory region 643022	1650 bp proximal
Tssr64797	transcription start site region 64797	1474 bp downstream
Tssr64798	transcription start site region 64798	1455 bp downstream
Tssr64799	transcription start site region 64799	1351 bp downstream
Tssr64800	transcription start site region 64800	1219 bp downstream