rs32273870 SNP Detail

Summary

• ID
  rs32273870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44150051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGAGGGAGG AGGGCTGGGG CCTAGACCTC TGGGTCTGAG
  GAAGGAAAAC CAGTCCTGGA TCTCTAGGCC TAAGGAGAAA GGAACTCCTC CCTTCTTCCA
  Y
  CTTCTTAGGG GTTCTAAGGA AAAGGCTACA GGGTCTGCAG CAGACTAGGG ACTGTGTGGC
  TGATATTGTT AGCCCAGGTG CCCTAAAAGA AACCACACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss46126301	mCV25287517	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss149113573	ENSMUSSNP5909359	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32273870					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44150051 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	177 bp distal
Garin5a	golgi associated RAB2 interactor 5A	within coordinates
Gm44646	predicted gene 44646	1062 bp upstream
Mybpc2	myosin binding protein C, fast-type	1072 bp downstream
Rr646111	regulatory region 646111	946 bp proximal
Rr646112	regulatory region 646112	1073 bp proximal
Rr646113	regulatory region 646113	1281 bp proximal