rs32273908 SNP Detail

Summary

• ID
  rs32273908
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:34974696 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTC GACGAAATCC AACTTCTTGG
  R
  GTCAAGATCC CCCTTCGGTT TAACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46126061	mCV23209389	ABI	CRAMUS_MOUSE	f	SNP		G					A
ss60993512	NES16129174	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A		G	G	G	G		G	G	G	G		G
ss148806142	ENSMUSSNP4136522	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss322156832	CHEV_7_36060290	CHEVERUD	SCREENING_POP	f	SNP												G					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32273908					SNP	G	G	G	G	G	A	A	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60993512	NES16129174	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:34974696 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18867	CpG island 18867	45 bp distal
Cpgi18868	CpG island 18868	245 bp proximal
Gm73037	predicted gene, 73037	within coordinates
Gpatch1	G patch domain containing 1	1273 bp downstream
Tssr72028	transcription start site region 72028	259 bp downstream
Tssr72029	transcription start site region 72029	275 bp downstream
Wdr88	WD repeat domain 88	within coordinates