rs32274771 SNP Detail

Summary

• ID
  rs32274771
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:44151022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAT GAGCTCCACC TTTGACTCTT
  R
  TAAATGCCAT GACAAGCAGT TCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46126077	mCV25287563	ABI	CRAMUS_MOUSE	f	SNP	A	A	G					G		G
ss51891389	NES14911108	PERLEGEN	MM_PANEL2	f	SNP			G	A	G	A	G		G	G	A	G		G	A	G	G		G
ss149113620	ENSMUSSNP12206	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G							G
ss322199075	CHEV_7_51756968	CHEVERUD	SCREENING_POP	f	SNP													A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32274771					SNP	A	A	G	A	G	A	G	G	G	G	A	G	A	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51891389	NES14911108	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:44151022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18970	CpG island 18970	1148 bp distal
Garin5a	golgi associated RAB2 interactor 5A	112 bp downstream
Gm44646	predicted gene 44646	91 bp upstream
Mybpc2	myosin binding protein C, fast-type	101 bp downstream
Rr646111	regulatory region 646111	within coordinates
Rr646112	regulatory region 646112	102 bp proximal
Rr646113	regulatory region 646113	310 bp proximal