rs32275471 SNP Detail

Summary

• ID
  rs32275471
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:74594077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTCTCT CCCTCTCTTC
  TAGAACTGAG ATGCTCAGAG TAGGTATCTC AGCTAGGAGT CTGAGTCCTA GTTCTGTGTG
  TTCTACAGTG CTGAGTCACC CTCTGTGGTC TTTGGTTTTG AGTATGGGAT AAAAGGATGT
  CAGTTAGAAG CAGTTGCTGG GAATTCTAGT GGACTCGAGG CCCTCTTTGG CGCAGCTTGC
  W
  GCAGAGAGGA CTGGGGGTTG GATTGACCCC AGGGGACCAC AAGCCTTGAG TCTTTCCAAG
  GTTGGAAGGA GGAGAACCCT GTGCCTGCTG GGACACAAGG CCCCTCCCCA GGGTCCACTC
  CTCTAGCACG GTGGCAGAGC TAGCTACTGC AGTATAGCAA CTGTGACCTT GGAGACAGCC
  AGAGTAGTGA TGGTTGCCAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39384369	mCV22743524	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	A
ss148149578	ENSMUSSNP1723724	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32275471					SNP	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:74594077 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7176	CpG island 7176	205 bp distal
Rr369952	regulatory region 369952	1128 bp upstream
Them6	thioesterase superfamily member 6	within coordinates
Tssr131582	transcription start site region 131582	994 bp downstream
Tssr131583	transcription start site region 131583	968 bp downstream
Tssr131584	transcription start site region 131584	554 bp downstream
Tssr131585	transcription start site region 131585	534 bp downstream
Tssr131586	transcription start site region 131586	528 bp downstream