rs32276776 SNP Detail

Summary

• ID
  rs32276776
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127407822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGTCCTAAAA TTCAATTCCC AACAACCACA TGAAGGTTCA CCACCATCTG CACAGCTACA
  GTGTACTCAT ATACATAAAA TAAATAAACA AATCTTTAAA AAAAAAAACC ACTGAAATAT
  TGTAAGAACA TATGTTCATT TCAATCCCAG GTGTGGGATA TGGGGCTGCT TCAGATGTCC
  ACAGCAGCTG ACTGTGATTT GCCTCGTGCT CTGGCAGGGG GATGGTTTTG CAAGTAGCAG
  ATAGTTTCTG CGACTGTGTG ATGTGGGATG AGAATACACA CACACACACA CACACACACA
  Y
  ACACACACAC ACACATATAT ACATATCACC AAAAGATGGG GTCAGTGGTG GTGGGCTGGT
  TGTTGGTTGG CTGCTGTTGG TTGTACTTTG TTGTGCAAAG AAGAAAGAAA TCCTGTTGGT
  GCTGAGGTGA AGATCAAACT TGCCCCAAGG AACCTGAAGC TGCTACTGAG CAGGAAGTAG
  TCTAACGATA ATGCTGCCCC CTTTCCCCTC TATCCTATTT TCTCTCCTAT CGGGTGTTAG
  GGGGTTGAAA GAGTGGAAGA AAGAAGAACC CGCTAAGCAC AACACTGGCG ACATCCTTGG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss46126787	mCV25229665	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145882823	ENSMUSSNP4232593	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs32276776					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127407822 () rs orientation: forward

Symbol	Name	Function Class
Stx1b	syntaxin 1B	within coordinates
Tssr75036	transcription start site region 75036	1658 bp upstream
Tssr75037	transcription start site region 75037	1616 bp upstream
Tssr75038	transcription start site region 75038	1382 bp upstream
Tssr75039	transcription start site region 75039	1320 bp upstream