rs32278594 SNP Detail

Summary

• ID
  rs32278594
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:34100667 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTGAACC ACTGAGCTGT
  CTCCAGCCCT ATGGAGCTTG ATTTTTGTAC AAAGAGTAAT TATATCTCAA GTTATAATAT
  TGGGTGTCTT TCTTGTTTAA GTCTATAGAG ATAAAACTTG GTATAGAAAG GAAAAAAACA
  CACCCATATA TTTTATATAT GAAGAGCTAG AGCAAGCTTT TGTGTATATC AGATTAAACT
  K
  CCATAGTTTT CTAGGTTGGC TTTATTTATT TTTTTAATAT ATTTCTCCCC TGCCTCCACC
  TTCATAATGC TGGGATTACA AGTGCATACC ACCACATGTA GTTGTTTTCT AGATCTTTGT
  TTTGATATAG AAGCAATCAG TGCCTCATTG GTAACTAGTT TCTAGTAGAG ATCATACAGG
  GCTATTAGCC AGGCACTGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39384751	mCV23549120	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss147537784	ENSMUSSNP959676	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32278594					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:34100667 () rs orientation: forward

Symbol	Name	Function Class
Mtdh	metadherin	within coordinates
Tssr131017	transcription start site region 131017	990 bp downstream
Tssr133963	transcription start site region 133963	988 bp upstream