rs32279105 SNP Detail

Summary

• ID
  rs32279105
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150322524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCGG GATAGACCAC AGCTAGTCTG
  S
  TGATTAGCCT GACCGATAGG TCCAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
ss45629319	mCV24222444	ABI	CRAMUS_MOUSE	f	SNP		G	C		G
ss46712628	NES10999567	PERLEGEN	MM_PANEL2	f	SNP	C			G	G	C		C
ss148050699	ENSMUSSNP3976070	ENSEMBL	ENSEMBL_Sanger	f	SNP		G			G
ss321428739	CHEV_4_149612176	CHEVERUD	SCREENING_POP	f	SNP							G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J
rs32279105					SNP	C	G	C	G	G	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46712628	NES10999567	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150322524 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15348	CpG island 15348	267 bp distal
Eno1	enolase 1, alpha non-neuron	within coordinates
Rr377416	regulatory region 377416	462 bp downstream
Rr605239	regulatory region 605239	1105 bp distal
Tssr40390	transcription start site region 40390	1300 bp downstream
Tssr40391	transcription start site region 40391	1287 bp downstream
Tssr40392	transcription start site region 40392	1271 bp downstream
Tssr40393	transcription start site region 40393	1258 bp downstream
Tssr40394	transcription start site region 40394	1248 bp downstream
Tssr40395	transcription start site region 40395	859 bp downstream
Tssr40396	transcription start site region 40396	828 bp downstream
Tssr40397	transcription start site region 40397	725 bp downstream
Tssr40398	transcription start site region 40398	362 bp downstream
Tssr40399	transcription start site region 40399	330 bp downstream