rs32279529 SNP Detail

Summary

• ID
  rs32279529
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175305205 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAT GCAATTAGCT CAAGAATATG
  Y
  TGCAAGGCGA GTGAGTGCCT TCGTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
ss45128253	mCV24623875	ABI	CRAMUS_MOUSE	f	SNP	T	T		C		T
ss46693436	NES10687502	PERLEGEN	MM_PANEL2	f	SNP			C		C			T
ss146321457	ENSMUSSNP5730087	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T				T
ss320151328	CHEV_1_177407770	CHEVERUD	SCREENING_POP	f	SNP							T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	SM/J
rs32279529					SNP	T	T	C	C	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46693436	NES10687502	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175305205 () rs orientation: forward

Symbol	Name	Function Class
Rgs7	regulator of G protein signaling 7	within coordinates
Tssr15391	transcription start site region 15391	1771 bp downstream
Tssr15392	transcription start site region 15392	1900 bp downstream