rs32284935 SNP Detail

Summary

• ID
  rs32284935
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:137639670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCGGCACA AGTGCCCCGT
  GCCTCTGCCG CCAGGGGGAG CCCTTGAGAA CCTGGTGGGA GCGTGCCACG TGGCTGAAGA
  AACGCTGGCG CAGGCGTCGT GGCGACACCT CTGAGGTGGG CTAGGACTTG GGCGCTCATG
  TAGTCAGGGC CGCGCGCAAG TGCAAGCACG GCGGTGGGTA TTGCCTGGTG CTTCACCAGT
  Y
  GCAGGATGTT GCCTTGGCTT GGGCCATGGG CCACAGGCCA GGAGGAGGCG ACCGAGGGGC
  TAGGCCTCCC CACCGGCACT GGTCACGGAG AGGCCTTGAG CTCTGGAGAG GAAACCATGA
  AGGAGCAAGA AACGCCTGTG CAGGACAGGT GAGGGCTTGG TGGGGGCCAC TAGGAGGCGT
  TGTGGGCGCT TTCCAAAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144532939	ENSMUSSNP484972	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32284935					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:137639670 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16844	CpG island 16844	within coordinates
Gm20605	predicted gene 20605	within coordinates
Irs3	insulin receptor substrate 3	1624 bp downstream
Lrch4	leucine-rich repeats and calponin homology (CH) domain containing 4	309 bp downstream
Sap25	sin3 associated polypeptide	65 bp upstream
Tssr49364	transcription start site region 49364	73 bp downstream