rs32286412 SNP Detail

Summary

• ID
  rs32286412
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:153615849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTTCTGATC CTTCATCTCA AAGTGGAGGT AATGACCGTG GGGGCGAATA GCTCACTTGG
  CTCCCGTCAC CTTCGAAGAC CATGGGATGG TACCTGTTCT GACCTGAGAG AGAGTGCAGT
  ATAGTGGTGA TGTACTTTTT CTTGGAATGC ACCCCATGCG CCTGTCCTCC GTGAACTCTC
  CACCCCCTAC CAAACCTCTC CTGTCACTTT TGAATTGTTT TCCTGCTTTT ACTAGAGGTC
  GGCGTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCCTCT
  Y
  TCTTTCTTTT TCCTGGCAAG CTGTGGGCAT ATGTCTGGTC TTCAAGCCTT CCTCTTCTCC
  TGGCACCCCA AGTCTCCGAC CTCGGGGGTG GGGACAGCCC CGTGCGCTCG AGACGAGGCC
  CTGGGGGCTA CCAGTCGTGC CCCACCCCTT CAGACTCCCC TCGCTGCCTC CTCCCTCCCA
  ACGCCCAGCC CCACTCTCTT ATTGGTCGGC GACGTTCGTC CCCGCCCCGC CCCACGGGGA
  TAAAAGCCTT AGTAGCCACG GGCCCGGCGC GTGCCGCTCT CCAGACCTCT TCTGCGCAGC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J
ss45129337	mCV24630557	ABI	CRAMUS_MOUSE	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J
rs32286412					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:153615849 () rs orientation: forward

Symbol	Name	Function Class
Cpgi870	CpG island 870	60 bp proximal
Gm28513	predicted gene 28513	within coordinates
Rgs16	regulator of G-protein signaling 16	250 bp upstream
Rr420741	regulatory region 420741	1891 bp distal
Rr420742	regulatory region 420742	within coordinates
Rr420743	regulatory region 420743	107 bp proximal
Tssr9477	transcription start site region 9477	241 bp upstream
Tssr9478	transcription start site region 9478	432 bp upstream