rs32288855 SNP Detail

Summary

• ID
  rs32288855
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:128615319 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GCTCTCCCTC AGAGGGCAGC CTCTAGAAGG TCTCTGGCCA GCATCTCATC TACTGGTTAT
  TCTAGTGGCT GGAGCCTGGT GGCCCCCACA GGGCCCCTCA GTACCTCCCA GGTGTCTTAC
  CAAGAGTTAC CTTTGTGCCC GATGAACAGT TTTGTTTTTG GTTTGCTTTA TTTGGTTGTT
  AAACTCTGAG CTGTCCAATG AGGGATTAGG AGACAGGGCT TAGGCTGCAG CCACTGTACA
  GTTTGTAATC CCCAAATGCC TGCTGGCGGT GTCTGTGGGG GCTCCTCCCT CCCCTCAAGA
  M
  TAGCACACTC CCCCCTTAAA TTCACACTGA TCCCCAAGTT TCTCAATTCA TCACTCATTG
  TCCTCACAAG ACCGCGTCTT GCGGGCCTTC TGCACTCCAT CTCCATGGGG GCCGGCCCCG
  GGCGAGCTTC ATTCTCCTCA CGCTTCCTGC TAGCTCTTCT TTCTGCTCCT TCTCTATTCC
  TGTTGGCAAC CTGCATTCCA TGTGGGGCTA TGATGACAGC TAGAAACCTG CAATGTGAAG
  AGGTGAAACT GAAGGAAGGC CACGCCTCCC CTGACTCAGT TTGAAGCCTT TGTGGTTGCA
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45630139	mCV25366949	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32288855					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:128615319 () rs orientation: forward

Symbol	Name	Function Class
Gm33712	predicted gene, 33712	within coordinates
Phc2	polyhomeotic 2	within coordinates
Rr600012	regulatory region 600012	932 bp distal
Rr600013	regulatory region 600013	79 bp distal
Tssr39071	transcription start site region 39071	655 bp upstream