rs32291024 SNP Detail

Summary

• ID
  rs32291024
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181339920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTTCATGAA AGGATGTGGA AGCTCTAAGA AGTAACATCT
  TCGTCCAGGA CTATAGGTAG TTGGATCTGT CGGGCCCCCT GACCCCTGAC CCCTGACCCC
  Y
  GACCCCTTTG GCTCCCTTGG CAAGACTGTT ATACTCTCCC AGAGAGTGAT TCCCTAACTG
  CCCAAGGATT CTTCCAGTGA TGGTTTCCCA GACTGCTCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45129785	mCV25244188	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss146396660	ENSMUSSNP4920059	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss320161708	CHEV_1_183442486	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32291024					SNP	C	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181339920 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	904 bp upstream
Cpgi1136	CpG island 1136	1491 bp distal
Rr424762	regulatory region 424762	761 bp distal
Rr424763	regulatory region 424763	850 bp distal
Rr424764	regulatory region 424764	86 bp proximal