rs32291198 SNP Detail

Summary

• ID
  rs32291198
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30813952 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTGTTGGTT AGCTGAGAAA TCCCTGAGAC CTAAGGGGAA
  ACTGAGGCAA GGCACTAGTA AGGTCATATG GGGTAGCGGG GAGGTACAGC CACACAGAAG
  R
  GCCAGTTAAT AGTTAATCAG ATAGACGAGG ATTTTGAGCG GGTGGTCTTG AGTCTGACAG
  GACACCAAGA CCTGAGTACA GGCTGGGAGA CGAAACAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46128291	mCV24563024	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148699891	ENSMUSSNP3342886	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss322139433	CHEV_7_31899546	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32291198					SNP	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30813952 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18835	CpG island 18835	1408 bp proximal
Hpn	hepsin	within coordinates
Scn1b	sodium channel, voltage-gated, type I, beta	1997 bp downstream
Tssr71932	transcription start site region 71932	173 bp downstream
Tssr71933	transcription start site region 71933	700 bp downstream