rs32291999 SNP Detail

Summary

• ID
  rs32291999
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:5083214 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGAAG TGCAGAGGGC GGGGCACGTG
  R
  GTTCATTTCC GCTTCCGGTC CGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46128302	mCV22918335	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148184629	ENSMUSSNP5363148	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322095915	CHEV_7_5031817	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32291999					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:5083214 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18280	CpG island 18280	within coordinates
Epn1	epsin 1	20 bp upstream
Rr167875	regulatory region 167875	within coordinates
Tssr64418	transcription start site region 64418	841 bp downstream
Tssr64419	transcription start site region 64419	718 bp downstream
Tssr64420	transcription start site region 64420	within coordinates
Tssr64421	transcription start site region 64421	111 bp upstream
Tssr64422	transcription start site region 64422	1707 bp upstream
U2af2	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	277 bp downstream