rs32297135 SNP Detail

Summary

• ID
  rs32297135
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:10981470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATTATTTT GTTGCATTTT
  AAAGGCTGAA AAAAGTTTCT AACTCAAAAT TGTAACTGTC CGTAAAACTG ACAGCTGACA
  AACCAAACTG ACTTCTAAAA CTCTCCCATT TAACCTGAGA TGAATAATTC TGATATCCCA
  GACTCTTCTA AATGCTGGGA TTATCCGCGT GCACAACACC GGCGTTTTAA GCGGTGCTGG
  M
  CTCCGCGCAC GGATTTAGCA ACTGGTCTAC ACCCCTGGCC CTATGGGCAT CTAGGAGAGG
  TTTCAAACAG TTGCAGGATG ACAACTAGTT TTCAGGGCGG CGAGGGAGAC ACCCAGTGGT
  TGCCTTCTTA CATTGATCTA AGGAGTTGAG TGCCTTTAAT CACTTACTGG GGGGTGAGGG
  TAGCGATTCA GGTGGCTCGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39386453	mCV24566643	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss147066958	ENSMUSSNP2862790	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32297135					SNP	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:10981470 () rs orientation: forward

Symbol	Name	Function Class
Amacr	alpha-methylacyl-CoA racemase	405 bp upstream
C1qtnf3	C1q and tumor necrosis factor related protein 3	1234 bp downstream
Cpgi6946	CpG island 6946	within coordinates
Gm34315	predicted gene, 34315	within coordinates
Rr301970	regulatory region 301970	1270 bp distal
Rr311562	regulatory region 311562	within coordinates
Tssr130700	transcription start site region 130700	363 bp upstream
Tssr130701	transcription start site region 130701	396 bp upstream