rs32297659 SNP Detail

Summary

• ID
  rs32297659
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191012863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGCACTGTGT GACAGAACTG TCCAAGAGTG GGCTGGGGCG ATGGCTCAGC AGTTAGGAGC
  ATTGTCTGCC CTTGCAGAGG ACGTGGGAGC CAGGCTTGAG TGAGTACAGA GAAATACACA
  CAGGCAAAAC CCTCATCGTA ATAAAAAAGT TAGAAGAGGG ACGGCAAACA AGCGTGTTCT
  CCGTGCTCTG CACTGTGGGT GTCGGTTTCT GCCCTGACTT CCCAGAAATG GCGGACTGTC
  ACCTGGATTG TAATCCAGAT AAACACTCCC CTGACTTGCT TCTGGGCATG GTGCCGCAGC
  M
  TGGGATGAAG ACAAGGGAAG ACTGAGGGTG AAGATTTAGG ATCAGAAAGC ATCAGGCAGA
  GAAGGCCACG GCCAGGGTGG CCCAAGCTGT CACCGGGTAA GCCTGTAGCC CCACGTGTGC
  CCATGAGAAT GGCACTGCAC TCAGTTCAGG CTTGTTGGGG AGTGAAGAGT TCAGACTCAC
  TACACAGAAC CCTGTCTCCT CCCAGAATGC ACAGCAGCTC TGCACTGTGT GCCTGGCTCC
  CTGACAGGAC TTCCCCACGA GTGTCCTGCC CTGGAGTTTC CCGAGCACAG GCTCCAGCAG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45129876	mCV23988309	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32297659					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191012863 () rs orientation: forward

Symbol	Name	Function Class
Gm37168	predicted gene, 37168	within coordinates
Rr426097	regulatory region 426097	58 bp proximal
Rr426098	regulatory region 426098	1845 bp proximal
Tssr373	transcription start site region 373	161 bp downstream
Tssr10760	transcription start site region 10760	748 bp upstream
Tssr10761	transcription start site region 10761	757 bp upstream
Tssr10762	transcription start site region 10762	787 bp upstream
Tssr10763	transcription start site region 10763	801 bp upstream
Tssr10764	transcription start site region 10764	831 bp upstream