rs32300629 SNP Detail

Summary

• ID
  rs32300629
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97144449 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTCG CCTCTGAGTC TCTTGCCAGT
  Y
  GCTTCTCATC AGCTCAGTCT CCCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss39386701	mCV25107157	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss148436358	ENSMUSSNP3948117	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs32300629					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97144449 () rs orientation: forward

Symbol	Name	Function Class
Amigo2	adhesion molecule with Ig like domain 2	within coordinates
Cpgi7615	CpG island 7615	977 bp distal
Cpgi7616	CpG island 7616	within coordinates
Gm57814	predicted gene, 57814	525 bp downstream
Pced1b	PC-esterase domain containing 1B	539 bp upstream
Rr312356	regulatory region 312356	within coordinates
Tssr132851	transcription start site region 132851	882 bp downstream
Tssr132852	transcription start site region 132852	390 bp upstream
Tssr132853	transcription start site region 132853	443 bp upstream
Tssr132854	transcription start site region 132854	823 bp upstream
Tssr136109	transcription start site region 136109	674 bp downstream
Tssr136110	transcription start site region 136110	738 bp downstream