rs32305516 SNP Detail

Summary

• ID
  rs32305516
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:73604308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGGCCGTC CCCAGGGGCC
  CCTTCAGGCC TGTGAGGACA GCCAGCGGCT TGGGGGTCTG TGCTGTGGAG TCCCCCAGTG
  GAGCAAGGGG GCAGGGAGCT GGGAGAACAG AGCCAGGCAG GGCTGGGAGC CGGGTGTGTG
  GCTGGAGTGG GGTTGAGACA TTTCATCTAG GAGCCATCTG ACCGTCTGTC CACCCCTCCC
  S
  CGCCCAGAGG AGGCCCAATA GTGCTGATCA CAGGACTCAG GCAAAGCCAC TTGGGGCTCC
  ATCCCAGGGT GGTCTGTGTG ATGTGTGTGG GATCCTGGGA ACAGGAGGGG ACACACGTTG
  CACGGACCAC CAGGTGGAGG CTGCATGGGG GAGGAGTGAT CTCAGGGCAG GAAGCGGAAG
  AGGTGCAGGA AGCAGATGTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss39388423	mCV23352511	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss148118197	ENSMUSSNP6631886	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32305516					SNP	G	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:73604308 () rs orientation: forward

Symbol	Name	Function Class
Ptp4a3	protein tyrosine phosphatase 4a3	within coordinates
Rr369950	regulatory region 369950	62 bp upstream