rs32305828 SNP Detail

Summary

• ID
  rs32305828
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:144055285 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCACTGT TCTCTCAGAT
  GTGGTAGCGA CAAAGACTTC CTTTGAGAGG TAGAGTACTT TGAGGACTGG GTCATGGATG
  CACCCTTATG GAGATTACTT GCATCGGCTT AGCTAGGGAG ATAGGCATTA CCATGGTAGC
  TCTGTTTTTC TGCTTTTTAT TTTTATGTTT GCAGTAGAGT TTCTGGACCA CATGGGAAGG
  K
  TAGGTTTCAA TTATAAATTC AGAAGATCAC AGAGTTGCGT CTTTGACATC AATATTGGCC
  AGTTAGTTTC CTATTTTTCT CTGTCTTTCT TTCACTAAAT GCAGAGCAGT TTAAGGACTT
  TTAAAAAATG AAAATAAAAA TTCTCTCTCC TCTCACCAAT CTTGGTGATA TGTACATGTG
  AGTGCAAATG CCCGTGGATG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45131423	mCV23179156	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss145634699	ENSMUSSNP5624201	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32305828					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:144055285 () rs orientation: forward

Symbol	Name	Function Class
Rr12883	regulatory region 12883	116 bp proximal
Rr30963	regulatory region 30963	540 bp distal
Rr396359	regulatory region 396359	1742 bp downstream
Rr396360	regulatory region 396360	1007 bp downstream