rs32308145 SNP Detail

Summary

• ID
  rs32308145
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84741201 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTCAGAGT AACCGTGAAT TGATAGAGAC TCATAACTAA
  CTCTTTCCGT GGGTCACAAG AAAAGGAGGA AGGAAGGAAA GAAAAGAAAA CTCAGGCACA
  Y
  CAGTCAGAAA TGTCTCTTCA ATGGATGCCA ACAGTCTACA TATTTCCTTT ACCCCTCAGG
  AGAAATCTCT CTCTCTCTCT CTCTCTCTCT CTCACACAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39388453	mCV23859074	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss148258158	ENSMUSSNP5064384	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32308145					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84741201 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7469	CpG island 7469	406 bp distal
Phf21b	PHD finger protein 21B	951 bp upstream
Tssr135727	transcription start site region 135727	1916 bp upstream
Tssr135728	transcription start site region 135728	1873 bp upstream
Tssr135729	transcription start site region 135729	1855 bp upstream
Tssr135730	transcription start site region 135730	1812 bp upstream
Tssr135731	transcription start site region 135731	968 bp upstream
Tssr135732	transcription start site region 135732	943 bp upstream
Tssr135733	transcription start site region 135733	909 bp upstream
Tssr135734	transcription start site region 135734	889 bp upstream
Tssr135735	transcription start site region 135735	861 bp upstream
Tssr135736	transcription start site region 135736	454 bp upstream