rs32308370 SNP Detail

Summary

• ID
  rs32308370
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:91179022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAA GTCCCGATCT GTTTCTTTCA
  R
  CTTGGAAGGT TAAACGGCCC TAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45131271	mCV25408050	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	A
ss144943438	ENSMUSSNP5224450	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32308370					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:91179022 () rs orientation: forward

Symbol	Name	Function Class
Cpgi571	CpG island 571	209 bp distal
Rr366958	regulatory region 366958	1054 bp downstream
Rr415586	regulatory region 415586	1964 bp distal
Rr415587	regulatory region 415587	724 bp distal
Rr415588	regulatory region 415588	within coordinates
Rr415589	regulatory region 415589	563 bp proximal
Tssr8065	transcription start site region 8065	1084 bp downstream
Tssr8066	transcription start site region 8066	990 bp downstream
Tssr8067	transcription start site region 8067	920 bp downstream
Tssr8068	transcription start site region 8068	792 bp downstream
Tssr8069	transcription start site region 8069	714 bp downstream
Tssr12938	transcription start site region 12938	1225 bp upstream
Tssr12939	transcription start site region 12939	72 bp downstream
Ube2f	ubiquitin-conjugating enzyme E2F (putative)	within coordinates