rs32309508 SNP Detail

Summary

• ID
  rs32309508
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:111936967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGAGCAGA CATGGCTGAC
  AGGGCAGAAA TGAGAGGGCA GAATGTCTGA TATCACCAGC TTTGGGGTGT GACACTGTGG
  TGTGGTCACC GCAGTGTGTG AGGACGTGCA GAGGGTCTCA CACGGCCCTG ACAGCATGTT
  CTTGAGTTTC ATCCTCTGAC TAGGCTACAG CGAGCTCCTG AAAGATCCAC CCTATATTCT
  Y
  GAAGGATGAT TTGGGTAGCA GTACAGAAGC TAGCTAGCTC AGAGGGAGCG AGGTAGGGAG
  CCAGCCCTGA CTCAGTGGAG AGTCAACTGT TCTATGAACA AGAGTTAGCT TGGATCGAGG
  GCACATGTTT AACCTCCAGG ATGAGCCAAA CTGTTCCGCT GAGCTCACAG TCTGCTGTTG
  GCCTGTCTCC TGCAGAGGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47150808	NES11596798	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32309508					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47150808	NES11596798	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:111936967 () rs orientation: forward

Symbol	Name	Function Class
Mical2	microtubule associated monooxygenase, calponin and LIM domain containing 2	within coordinates
Tssr68564	transcription start site region 68564	1154 bp downstream