rs32309769 SNP Detail

Summary

• ID
  rs32309769
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:30823866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGAGGCA GGTGGATTTC
  TGAGTTCGAG GCCAGCCTGG TCTCAAAGTG AGTTCCAGGA CAGCCAGGAC TACACAGAGA
  ACCCTGTCTC AAAAAACCAA AAACCAAAAC CAAAACCAAA ACCAAAAAAA AAAAAAAGCT
  TCTACTCTTT GATTTTGCTC TATGGCTGTC CAAGACATTT TTGCTGGTGC CAAGTAATTC
  M
  AGTGACATTT TTTGACATTT TCCCCCCTAC CAGCCATAAT GCCAGCTGCA TCAACTCATT
  CAGCCCTCAC ACAGACCTAG GGAGTTGAAG CCAGCGAGAT GGCTTAGCAA GTGAAGGTGC
  TTGCCACCAC TCTGGCAGCC TGGCTTCGAT CCTTAGGACC CGTGTGGTGA AATGACAGAA
  TGGACTTCTT CAACTTGTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46130800	mCV24561611	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss148700207	ENSMUSSNP5209772	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32309769					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:30823866 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18836	CpG island 18836	675 bp proximal
Cpgi18837	CpG island 18837	1753 bp proximal
Rr645025	regulatory region 645025	1415 bp proximal
Scn1b	sodium channel, voltage-gated, type I, beta	within coordinates